Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.56■□□□□ 0.88
MDH1P40925 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.56■□□□□ 0.88
MDH1P40925 AC004987.1-201ENST00000428627 508 ntBASIC20.56■□□□□ 0.88
MDH1P40925 ATP5G2P3-201ENST00000429083 425 ntBASIC20.56■□□□□ 0.88
MDH1P40925 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.56■□□□□ 0.88
MDH1P40925 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
MDH1P40925 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
MDH1P40925 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MDH1P40925 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MDH1P40925 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.55■□□□□ 0.88
MDH1P40925 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.55■□□□□ 0.88
MDH1P40925 AC006455.2-201ENST00000429931 906 ntBASIC20.55■□□□□ 0.88
MDH1P40925 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.55■□□□□ 0.88
MDH1P40925 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.55■□□□□ 0.88
MDH1P40925 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MDH1P40925 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
MDH1P40925 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.54■□□□□ 0.88
MDH1P40925 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MDH1P40925 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MDH1P40925 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
MDH1P40925 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MDH1P40925 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MDH1P40925 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.54■□□□□ 0.88
MDH1P40925 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.53■□□□□ 0.88
MDH1P40925 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
MDH1P40925 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.53■□□□□ 0.88
MDH1P40925 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.53■□□□□ 0.88
MDH1P40925 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.53■□□□□ 0.88
MDH1P40925 ABHD17AP5-201ENST00000580133 923 ntBASIC20.53■□□□□ 0.88
MDH1P40925 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.53■□□□□ 0.88
MDH1P40925 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
MDH1P40925 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MDH1P40925 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.53■□□□□ 0.88
MDH1P40925 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MDH1P40925 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MDH1P40925 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
MDH1P40925 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.52■□□□□ 0.88
MDH1P40925 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.52■□□□□ 0.88
MDH1P40925 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.52■□□□□ 0.88
MDH1P40925 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.52■□□□□ 0.88
MDH1P40925 AC092028.1-203ENST00000608262 953 ntBASIC20.52■□□□□ 0.88
MDH1P40925 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
MDH1P40925 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.52■□□□□ 0.88
MDH1P40925 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MDH1P40925 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
MDH1P40925 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MDH1P40925 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms