Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.13■■□□□ 1.77
COL15A1P39059 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.13■■□□□ 1.77
COL15A1P39059 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL15A1P39059 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
COL15A1P39059 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL15A1P39059 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL15A1P39059 AC211429.1-201ENST00000415277 523 ntBASIC26.12■■□□□ 1.77
COL15A1P39059 TSPY7P-201ENST00000431358 1114 ntBASIC26.12■■□□□ 1.77
COL15A1P39059 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL15A1P39059 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.12■■□□□ 1.77
COL15A1P39059 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL15A1P39059 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL15A1P39059 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.12■■□□□ 1.77
COL15A1P39059 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.12■■□□□ 1.77
COL15A1P39059 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
COL15A1P39059 AC239809.2-201ENST00000415381 517 ntBASIC26.11■■□□□ 1.77
COL15A1P39059 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 BX088651.1-201ENST00000540551 451 ntBASIC26.11■■□□□ 1.77
COL15A1P39059 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.11■■□□□ 1.77
COL15A1P39059 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.11■■□□□ 1.77
COL15A1P39059 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.11■■□□□ 1.77
COL15A1P39059 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL15A1P39059 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
COL15A1P39059 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.1■■□□□ 1.77
COL15A1P39059 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.1■■□□□ 1.77
COL15A1P39059 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
COL15A1P39059 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.1■■□□□ 1.77
COL15A1P39059 AL023875.1-201ENST00000640777 796 ntBASIC26.1■■□□□ 1.77
COL15A1P39059 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 AC244015.2-201ENST00000616358 1861 ntBASIC26.1■■□□□ 1.77
COL15A1P39059 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL15A1P39059 FAM210CP-201ENST00000445714 574 ntBASIC26.09■■□□□ 1.77
COL15A1P39059 AC005829.2-201ENST00000571422 1056 ntBASIC26.09■■□□□ 1.77
COL15A1P39059 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COL15A1P39059 LINC01023-201ENST00000606054 436 ntBASIC26.09■■□□□ 1.77
COL15A1P39059 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL15A1P39059 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL15A1P39059 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.09■■□□□ 1.77
COL15A1P39059 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
COL15A1P39059 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
COL15A1P39059 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
COL15A1P39059 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
COL15A1P39059 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
COL15A1P39059 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 REXO1L12P-201ENST00000622156 912 ntBASIC26.08■■□□□ 1.77
COL15A1P39059 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.08■■□□□ 1.77
COL15A1P39059 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.08■■□□□ 1.77
COL15A1P39059 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.08■■□□□ 1.77
COL15A1P39059 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.08■■□□□ 1.77
COL15A1P39059 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL15A1P39059 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
COL15A1P39059 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
COL15A1P39059 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.07■■□□□ 1.76
COL15A1P39059 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.07■■□□□ 1.76
COL15A1P39059 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.07■■□□□ 1.76
COL15A1P39059 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 AL049637.2-201ENST00000641778 930 ntBASIC26.07■■□□□ 1.76
COL15A1P39059 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.07■■□□□ 1.76
COL15A1P39059 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms