Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 SPO75YLL005C 2607 nt0.86□□□□□ -2.27
RPB11P38902 YJL049WYJL049W 1353 nt0.86□□□□□ -2.27
RPB11P38902 SPT14YPL175W 1359 nt0.86□□□□□ -2.27
RPB11P38902 KAP122YGL016W 3246 nt0.86□□□□□ -2.27
RPB11P38902 SRD1YCR018C 666 nt0.86□□□□□ -2.27
RPB11P38902 YDR336WYDR336W 945 nt0.86□□□□□ -2.27
RPB11P38902 YGL177WYGL177W 348 nt0.86□□□□□ -2.27
RPB11P38902 RPL40AYIL148W 387 nt0.86□□□□□ -2.27
RPB11P38902 YIR023C-AYIR023C-A 324 nt0.86□□□□□ -2.27
RPB11P38902 YJL022WYJL022W 309 nt0.86□□□□□ -2.27
RPB11P38902 MIX23YBL107C 591 nt0.86□□□□□ -2.27
RPB11P38902 PET123YOR158W 957 nt0.86□□□□□ -2.27
RPB11P38902 MGE1YOR232W 687 nt0.86□□□□□ -2.27
RPB11P38902 AZF1YOR113W 2745 nt0.85□□□□□ -2.27
RPB11P38902 IRE1YHR079C 3348 nt0.85□□□□□ -2.27
RPB11P38902 LSM6YDR378C 261 nt0.85□□□□□ -2.27
RPB11P38902 YER091C-AYER091C-A 222 nt0.85□□□□□ -2.27
RPB11P38902 FAR7YFR008W 666 nt0.85□□□□□ -2.27
RPB11P38902 TEX1YNL253W 1269 nt0.85□□□□□ -2.27
RPB11P38902 YOL050CYOL050C 321 nt0.85□□□□□ -2.27
RPB11P38902 YOR394C-AYOR394C-A 168 nt0.85□□□□□ -2.27
RPB11P38902 SMC1YFL008W 3678 nt0.85□□□□□ -2.27
RPB11P38902 SFB2YNL049C 2631 nt0.85□□□□□ -2.27
RPB11P38902 SPE1YKL184W 1401 nt0.84□□□□□ -2.27
RPB11P38902 YDL032WYDL032W 312 nt0.84□□□□□ -2.27
RPB11P38902 VOA1YGR106C 798 nt0.84□□□□□ -2.27
RPB11P38902 CSI2YOL007C 1026 nt0.84□□□□□ -2.27
RPB11P38902 GRX7YBR014C 612 nt0.84□□□□□ -2.27
RPB11P38902 ARL3YPL051W 597 nt0.84□□□□□ -2.27
RPB11P38902 YPR063CYPR063C 423 nt0.84□□□□□ -2.27
RPB11P38902 YLR422WYLR422W 5799 nt0.84□□□□□ -2.28
RPB11P38902 BEM2YER155C 6504 nt0.83□□□□□ -2.28
RPB11P38902 SPO22YIL073C 2928 nt0.83□□□□□ -2.28
RPB11P38902 SEC28YIL076W 891 nt0.83□□□□□ -2.28
RPB11P38902 ECI1YLR284C 843 nt0.83□□□□□ -2.28
RPB11P38902 NST1YNL091W 3723 nt0.83□□□□□ -2.28
RPB11P38902 SSF2YDR312W 1362 nt0.83□□□□□ -2.28
RPB11P38902 MSS11YMR164C 2277 nt0.82□□□□□ -2.28
RPB11P38902 BFA1YJR053W 1725 nt0.82□□□□□ -2.28
RPB11P38902 snR63snR63 255 nt0.82□□□□□ -2.28
RPB11P38902 RPS26BYER131W 360 nt0.82□□□□□ -2.28
RPB11P38902 YJL119CYJL119C 324 nt0.82□□□□□ -2.28
RPB11P38902 VPS55YJR044C 423 nt0.82□□□□□ -2.28
RPB11P38902 COF1YLL050C 432 nt0.82□□□□□ -2.28
RPB11P38902 DLT1YMR126C 1029 nt0.82□□□□□ -2.28
RPB11P38902 CIN2YPL241C 807 nt0.82□□□□□ -2.28
RPB11P38902 YJR029WYJR029W 5268 nt0.82□□□□□ -2.28
RPB11P38902 YPR137C-BYPR137C-B 5268 nt0.82□□□□□ -2.28
RPB11P38902 UFD2YDL190C 2886 nt0.82□□□□□ -2.28
RPB11P38902 PLP1YDR183W 693 nt0.81□□□□□ -2.28
RPB11P38902 MSH3YCR092C 3057 nt0.81□□□□□ -2.28
RPB11P38902 SAS4YDR181C 1446 nt0.81□□□□□ -2.28
RPB11P38902 NCL1YBL024W 2055 nt0.8□□□□□ -2.28
RPB11P38902 MMS22YLR320W 4365 nt0.8□□□□□ -2.28
RPB11P38902 MVP1YMR004W 1536 nt0.8□□□□□ -2.28
RPB11P38902 ARP5YNL059C 2268 nt0.8□□□□□ -2.28
RPB11P38902 YDL157CYDL157C 357 nt0.8□□□□□ -2.28
RPB11P38902 CAJ1YER048C 1176 nt0.8□□□□□ -2.28
RPB11P38902 YET1YKL065C 621 nt0.8□□□□□ -2.28
RPB11P38902 YNL114CYNL114C 372 nt0.8□□□□□ -2.28
RPB11P38902 AEP1YMR064W 1557 nt0.79□□□□□ -2.28
RPB11P38902 ZRG8YER033C 3231 nt0.79□□□□□ -2.28
RPB11P38902 YHL037CYHL037C 402 nt0.79□□□□□ -2.28
RPB11P38902 YJL114WYJL114W 681 nt0.79□□□□□ -2.28
RPB11P38902 HSK3YKL138C-A 210 nt0.79□□□□□ -2.28
RPB11P38902 POP8YBL018C 402 nt0.79□□□□□ -2.28
RPB11P38902 YOR114WYOR114W 885 nt0.79□□□□□ -2.28
RPB11P38902 MUM2YBR057C 1101 nt0.79□□□□□ -2.28
RPB11P38902 YBR287WYBR287W 1284 nt0.79□□□□□ -2.28
RPB11P38902 ECM25YJL201W 1800 nt0.79□□□□□ -2.28
RPB11P38902 SIP4YJL089W 2490 nt0.79□□□□□ -2.28
RPB11P38902 DOT6YER088C 2013 nt0.79□□□□□ -2.28
RPB11P38902 NCS2YNL119W 1482 nt0.79□□□□□ -2.28
RPB11P38902 YCR090CYCR090C 549 nt0.78□□□□□ -2.28
RPB11P38902 YDR199WYDR199W 366 nt0.78□□□□□ -2.28
RPB11P38902 YDR537CYDR537C 606 nt0.78□□□□□ -2.28
RPB11P38902 YGR053CYGR053C 852 nt0.78□□□□□ -2.28
RPB11P38902 tV(UAC)BtV(UAC)B 74 nt0.78□□□□□ -2.28
RPB11P38902 tV(UAC)DtV(UAC)D 74 nt0.78□□□□□ -2.28
RPB11P38902 YNL162W-AYNL162W-A 219 nt0.78□□□□□ -2.28
RPB11P38902 RPN8YOR261C 1017 nt0.78□□□□□ -2.28
RPB11P38902 SHG1YBR258C 429 nt0.78□□□□□ -2.28
RPB11P38902 ARP9YMR033W 1404 nt0.78□□□□□ -2.28
RPB11P38902 DGR2YKL121W 2559 nt0.78□□□□□ -2.28
RPB11P38902 YGR250CYGR250C 2346 nt0.77□□□□□ -2.29
RPB11P38902 SLK19YOR195W 2466 nt0.77□□□□□ -2.29
RPB11P38902 SNF5YBR289W 2718 nt0.77□□□□□ -2.29
RPB11P38902 NSE4YDL105W 1209 nt0.77□□□□□ -2.29
RPB11P38902 YGL014C-AYGL014C-A 162 nt0.77□□□□□ -2.29
RPB11P38902 RPI1YIL119C 1224 nt0.77□□□□□ -2.29
RPB11P38902 ARG3YJL088W 1017 nt0.77□□□□□ -2.29
RPB11P38902 BUD19YJL188C 309 nt0.77□□□□□ -2.29
RPB11P38902 RPS18BYML026C 441 nt0.77□□□□□ -2.29
RPB11P38902 SNC2YOR327C 348 nt0.77□□□□□ -2.29
RPB11P38902 YDR210W-AYDR210W-A 1317 nt0.77□□□□□ -2.29
RPB11P38902 YOR343W-AYOR343W-A 1317 nt0.77□□□□□ -2.29
RPB11P38902 MUK1YPL070W 1839 nt0.76□□□□□ -2.29
RPB11P38902 YDL025W-AYDL025W-A 105 nt0.76□□□□□ -2.29
RPB11P38902 YIP1YGR172C 747 nt0.76□□□□□ -2.29
RPB11P38902 YKL065W-AYKL065W-A 222 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 43.9 ms