Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.69■□□□□ 0.42
CD40P25942 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.69■□□□□ 0.42
CD40P25942 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
CD40P25942 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.69■□□□□ 0.42
CD40P25942 HLA-B-256ENST00000639848 1089 ntBASIC17.69■□□□□ 0.42
CD40P25942 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.69■□□□□ 0.42
CD40P25942 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.69■□□□□ 0.42
CD40P25942 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD40P25942 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.69■□□□□ 0.42
CD40P25942 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD40P25942 ESRRAP1-201ENST00000400596 1257 ntBASIC17.68■□□□□ 0.42
CD40P25942 UNC93B5-201ENST00000530315 699 ntBASIC17.68■□□□□ 0.42
CD40P25942 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 AC060766.5-201ENST00000590539 871 ntBASIC17.68■□□□□ 0.42
CD40P25942 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40P25942 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40P25942 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.68■□□□□ 0.42
CD40P25942 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD40P25942 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD40P25942 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD40P25942 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD40P25942 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 AL356652.1-201ENST00000615962 565 ntBASIC17.67■□□□□ 0.42
CD40P25942 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40P25942 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD40P25942 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CD40P25942 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD40P25942 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 KRT18P29-201ENST00000397031 1267 ntBASIC17.66■□□□□ 0.42
CD40P25942 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.66■□□□□ 0.42
CD40P25942 C2orf69P4-201ENST00000565394 541 ntBASIC17.66■□□□□ 0.42
CD40P25942 ITM2C-210ENST00000620962 501 ntBASIC17.66■□□□□ 0.42
CD40P25942 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CD40P25942 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40P25942 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40P25942 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
CD40P25942 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40P25942 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CD40P25942 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40P25942 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.65■□□□□ 0.42
CD40P25942 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 LINC00565-201ENST00000562710 2331 ntBASIC17.65■□□□□ 0.42
CD40P25942 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40P25942 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40P25942 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.64■□□□□ 0.42
CD40P25942 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD40P25942 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CD40P25942 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms