Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC092053.2-201ENST00000640557 1818 ntBASIC17.43■□□□□ 0.38
APCP25054 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.43■□□□□ 0.38
APCP25054 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 AC027702.1-201ENST00000563810 1770 ntBASIC17.43■□□□□ 0.38
APCP25054 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
APCP25054 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APCP25054 MIR1238-201ENST00000408483 83 ntBASIC17.43■□□□□ 0.38
APCP25054 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.43■□□□□ 0.38
APCP25054 AP000550.4-202ENST00000639755 178 ntBASIC17.43■□□□□ 0.38
APCP25054 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
APCP25054 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.42■□□□□ 0.38
APCP25054 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.42■□□□□ 0.38
APCP25054 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.42■□□□□ 0.38
APCP25054 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.42■□□□□ 0.38
APCP25054 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
APCP25054 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.42■□□□□ 0.38
APCP25054 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.42■□□□□ 0.38
APCP25054 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APCP25054 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.42■□□□□ 0.38
APCP25054 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.42■□□□□ 0.38
APCP25054 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.42■□□□□ 0.38
APCP25054 CYP21A1P-202ENST00000354927 1481 ntBASIC17.42■□□□□ 0.38
APCP25054 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APCP25054 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.41■□□□□ 0.38
APCP25054 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.41■□□□□ 0.38
APCP25054 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.41■□□□□ 0.38
APCP25054 AC063952.2-201ENST00000498792 1227 ntBASIC17.41■□□□□ 0.38
APCP25054 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.41■□□□□ 0.38
APCP25054 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
APCP25054 AC124283.5-201ENST00000624661 1809 ntBASIC17.41■□□□□ 0.38
APCP25054 AK4P3-201ENST00000418260 669 ntBASIC17.41■□□□□ 0.38
APCP25054 AL450487.1-201ENST00000426799 995 ntBASIC17.41■□□□□ 0.38
APCP25054 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.41■□□□□ 0.38
APCP25054 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
APCP25054 AC026471.6-201ENST00000622954 1905 ntBASIC17.41■□□□□ 0.38
APCP25054 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
APCP25054 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APCP25054 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.4■□□□□ 0.38
APCP25054 AC116562.2-201ENST00000507042 360 ntBASIC17.4■□□□□ 0.38
APCP25054 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
APCP25054 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.4■□□□□ 0.38
APCP25054 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APCP25054 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APCP25054 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APCP25054 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.4■□□□□ 0.38
APCP25054 AC022616.7-201ENST00000525383 220 ntBASIC17.4■□□□□ 0.38
APCP25054 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.4■□□□□ 0.38
APCP25054 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
APCP25054 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.4■□□□□ 0.38
APCP25054 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
APCP25054 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APCP25054 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.39■□□□□ 0.38
APCP25054 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
APCP25054 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.39■□□□□ 0.38
APCP25054 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
APCP25054 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.39■□□□□ 0.37
APCP25054 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.39■□□□□ 0.37
APCP25054 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.39■□□□□ 0.37
APCP25054 AL031133.1-201ENST00000406807 723 ntBASIC17.39■□□□□ 0.37
APCP25054 FAM8A6P-201ENST00000407496 1135 ntBASIC17.39■□□□□ 0.37
APCP25054 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.39■□□□□ 0.37
APCP25054 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.39■□□□□ 0.37
APCP25054 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.39■□□□□ 0.37
APCP25054 HTR7P1-201ENST00000538670 1336 ntBASIC17.39■□□□□ 0.37
APCP25054 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.39■□□□□ 0.37
APCP25054 NBPF21P-201ENST00000425093 1451 ntBASIC17.39■□□□□ 0.37
APCP25054 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
APCP25054 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APCP25054 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.39■□□□□ 0.37
APCP25054 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.39■□□□□ 0.37
APCP25054 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.39■□□□□ 0.37
APCP25054 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APCP25054 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APCP25054 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APCP25054 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APCP25054 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms