Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.88■□□□□ 0.61
PRKCAP17252 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.88■□□□□ 0.61
PRKCAP17252 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRKCAP17252 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRKCAP17252 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.88■□□□□ 0.61
PRKCAP17252 RARRES2P11-201ENST00000635158 484 ntBASIC18.88■□□□□ 0.61
PRKCAP17252 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.88■□□□□ 0.61
PRKCAP17252 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRKCAP17252 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PRKCAP17252 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PRKCAP17252 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRKCAP17252 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRKCAP17252 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRKCAP17252 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PRKCAP17252 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRKCAP17252 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
PRKCAP17252 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.87■□□□□ 0.61
PRKCAP17252 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.87■□□□□ 0.61
PRKCAP17252 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.87■□□□□ 0.61
PRKCAP17252 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRKCAP17252 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRKCAP17252 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 RBM17P2-201ENST00000616397 1405 ntBASIC18.86■□□□□ 0.61
PRKCAP17252 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRKCAP17252 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.86■□□□□ 0.61
PRKCAP17252 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.86■□□□□ 0.61
PRKCAP17252 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRKCAP17252 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.86■□□□□ 0.61
PRKCAP17252 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCAP17252 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.85■□□□□ 0.61
PRKCAP17252 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRKCAP17252 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PRKCAP17252 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.85■□□□□ 0.61
PRKCAP17252 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.85■□□□□ 0.61
PRKCAP17252 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.85■□□□□ 0.61
PRKCAP17252 AC243732.1-201ENST00000612648 864 ntBASIC18.85■□□□□ 0.61
PRKCAP17252 AL157384.1-201ENST00000445995 2473 ntBASIC18.85■□□□□ 0.61
PRKCAP17252 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.85■□□□□ 0.61
PRKCAP17252 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCAP17252 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PRKCAP17252 LINC01521-201ENST00000504184 1943 ntBASIC18.84■□□□□ 0.61
PRKCAP17252 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRKCAP17252 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.84■□□□□ 0.61
PRKCAP17252 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.84■□□□□ 0.61
PRKCAP17252 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PRKCAP17252 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
PRKCAP17252 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 MFSD11-216ENST00000590393 1141 ntBASIC18.84■□□□□ 0.61
PRKCAP17252 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 AC010536.3-201ENST00000620306 533 ntBASIC18.84■□□□□ 0.61
PRKCAP17252 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.84■□□□□ 0.61
PRKCAP17252 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRKCAP17252 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCAP17252 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRKCAP17252 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.83■□□□□ 0.61
PRKCAP17252 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRKCAP17252 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PRKCAP17252 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.83■□□□□ 0.61
PRKCAP17252 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRKCAP17252 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.83■□□□□ 0.6
PRKCAP17252 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKCAP17252 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.83■□□□□ 0.6
PRKCAP17252 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms