Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
UBL4AP11441 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.88■□□□□ 0.61
UBL4AP11441 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UBL4AP11441 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.88■□□□□ 0.61
UBL4AP11441 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.88■□□□□ 0.61
UBL4AP11441 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UBL4AP11441 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.88■□□□□ 0.61
UBL4AP11441 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBL4AP11441 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.88■□□□□ 0.61
UBL4AP11441 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.87■□□□□ 0.61
UBL4AP11441 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBL4AP11441 AC006015.1-201ENST00000429970 570 ntBASIC18.87■□□□□ 0.61
UBL4AP11441 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 TERF1P5-201ENST00000477545 1207 ntBASIC18.87■□□□□ 0.61
UBL4AP11441 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBL4AP11441 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBL4AP11441 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.87■□□□□ 0.61
UBL4AP11441 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
UBL4AP11441 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UBL4AP11441 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
UBL4AP11441 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
UBL4AP11441 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.86■□□□□ 0.61
UBL4AP11441 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UBL4AP11441 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.86■□□□□ 0.61
UBL4AP11441 MFSD11-216ENST00000590393 1141 ntBASIC18.86■□□□□ 0.61
UBL4AP11441 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBL4AP11441 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBL4AP11441 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UBL4AP11441 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
UBL4AP11441 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.85■□□□□ 0.61
UBL4AP11441 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.85■□□□□ 0.61
UBL4AP11441 AC007322.3-201ENST00000426526 701 ntBASIC18.85■□□□□ 0.61
UBL4AP11441 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.85■□□□□ 0.61
UBL4AP11441 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
UBL4AP11441 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
UBL4AP11441 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBL4AP11441 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.84■□□□□ 0.61
UBL4AP11441 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBL4AP11441 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.84■□□□□ 0.61
UBL4AP11441 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.84■□□□□ 0.61
UBL4AP11441 CDV3P1-201ENST00000471403 739 ntBASIC18.84■□□□□ 0.61
UBL4AP11441 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.84■□□□□ 0.61
UBL4AP11441 AC022517.1-201ENST00000592429 346 ntBASIC18.84■□□□□ 0.61
UBL4AP11441 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 AC013268.1-206ENST00000638368 961 ntBASIC18.84■□□□□ 0.61
UBL4AP11441 AC112229.1-201ENST00000639295 961 ntBASIC18.84■□□□□ 0.61
UBL4AP11441 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBL4AP11441 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBL4AP11441 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
UBL4AP11441 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBL4AP11441 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBL4AP11441 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms