Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 BX842568.3-201ENST00000418104 571 ntBASIC15.55■□□□□ 0.08
TCRAP04437 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.55■□□□□ 0.08
TCRAP04437 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRAP04437 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRAP04437 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRAP04437 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCRAP04437 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 AC018445.3-201ENST00000624177 1945 ntBASIC15.54■□□□□ 0.08
TCRAP04437 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TCRAP04437 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRAP04437 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TCRAP04437 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRAP04437 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TCRAP04437 AC116562.4-201ENST00000641316 2276 ntBASIC15.54■□□□□ 0.08
TCRAP04437 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRAP04437 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TCRAP04437 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
TCRAP04437 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.53■□□□□ 0.08
TCRAP04437 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.53■□□□□ 0.08
TCRAP04437 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 MIR4466-201ENST00000606121 54 ntBASIC15.53■□□□□ 0.08
TCRAP04437 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.53■□□□□ 0.08
TCRAP04437 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 AL035685.1-201ENST00000636663 812 ntBASIC15.53■□□□□ 0.08
TCRAP04437 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TCRAP04437 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRAP04437 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRAP04437 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRAP04437 BX323043.1-201ENST00000641006 1765 ntBASIC15.52■□□□□ 0.08
TCRAP04437 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRAP04437 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRAP04437 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
TCRAP04437 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRAP04437 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRAP04437 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRAP04437 AL020996.1-203ENST00000536896 2307 ntBASIC15.52■□□□□ 0.07
TCRAP04437 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRAP04437 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.52■□□□□ 0.07
TCRAP04437 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TCRAP04437 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TCRAP04437 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TCRAP04437 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.52■□□□□ 0.07
TCRAP04437 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRAP04437 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRAP04437 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TCRAP04437 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRAP04437 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms