Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.24■■□□□ 1.31
HMGCRP04035 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HMGCRP04035 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCRP04035 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.24■■□□□ 1.31
HMGCRP04035 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.24■■□□□ 1.31
HMGCRP04035 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCRP04035 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.24■■□□□ 1.31
HMGCRP04035 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCRP04035 AC026471.6-201ENST00000622954 1905 ntBASIC23.23■■□□□ 1.31
HMGCRP04035 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.23■■□□□ 1.31
HMGCRP04035 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.23■■□□□ 1.31
HMGCRP04035 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.23■■□□□ 1.31
HMGCRP04035 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 RN7SL850P-201ENST00000579959 291 ntBASIC23.23■■□□□ 1.31
HMGCRP04035 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.23■■□□□ 1.31
HMGCRP04035 AL353708.3-201ENST00000610272 989 ntBASIC23.23■■□□□ 1.31
HMGCRP04035 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.23■■□□□ 1.31
HMGCRP04035 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.23■■□□□ 1.31
HMGCRP04035 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HMGCRP04035 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.23■■□□□ 1.31
HMGCRP04035 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCRP04035 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCRP04035 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCRP04035 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.22■■□□□ 1.31
HMGCRP04035 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCRP04035 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 KRT18P35-201ENST00000510488 1269 ntBASIC23.22■■□□□ 1.31
HMGCRP04035 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.22■■□□□ 1.31
HMGCRP04035 AC026471.5-201ENST00000615068 467 ntBASIC23.22■■□□□ 1.31
HMGCRP04035 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCRP04035 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.22■■□□□ 1.31
HMGCRP04035 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCRP04035 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.22■■□□□ 1.31
HMGCRP04035 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.22■■□□□ 1.31
HMGCRP04035 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCRP04035 AC010542.4-201ENST00000563151 1910 ntBASIC23.21■■□□□ 1.31
HMGCRP04035 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.21■■□□□ 1.31
HMGCRP04035 AL390719.1-204ENST00000412397 1219 ntBASIC23.21■■□□□ 1.31
HMGCRP04035 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
HMGCRP04035 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.21■■□□□ 1.31
HMGCRP04035 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 AC127496.7-201ENST00000625110 1798 ntBASIC23.21■■□□□ 1.31
HMGCRP04035 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGCRP04035 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCRP04035 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
HMGCRP04035 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.2■■□□□ 1.3
HMGCRP04035 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
HMGCRP04035 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.2■■□□□ 1.3
HMGCRP04035 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
HMGCRP04035 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.2■■□□□ 1.3
HMGCRP04035 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.2■■□□□ 1.3
HMGCRP04035 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.2■■□□□ 1.3
HMGCRP04035 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 AC233723.2-201ENST00000623798 2106 ntBASIC23.2■■□□□ 1.3
HMGCRP04035 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCRP04035 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
HMGCRP04035 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.19■■□□□ 1.3
HMGCRP04035 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.19■■□□□ 1.3
HMGCRP04035 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 AP003071.4-201ENST00000562276 1284 ntBASIC23.19■■□□□ 1.3
HMGCRP04035 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.19■■□□□ 1.3
HMGCRP04035 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
HMGCRP04035 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
HMGCRP04035 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCRP04035 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCRP04035 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCRP04035 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCRP04035 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
HMGCRP04035 PGM5P4-201ENST00000421970 445 ntBASIC23.18■■□□□ 1.3
HMGCRP04035 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCRP04035 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.18■■□□□ 1.3
HMGCRP04035 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms