Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
CSPG5O95196 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.99■■□□□ 1.11
CSPG5O95196 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.99■■□□□ 1.11
CSPG5O95196 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSPG5O95196 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.98■■□□□ 1.11
CSPG5O95196 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.98■■□□□ 1.11
CSPG5O95196 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.98■■□□□ 1.11
CSPG5O95196 AC133561.5-201ENST00000635547 218 ntBASIC21.98■■□□□ 1.11
CSPG5O95196 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CSPG5O95196 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.98■■□□□ 1.11
CSPG5O95196 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.98■■□□□ 1.11
CSPG5O95196 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSPG5O95196 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.97■■□□□ 1.11
CSPG5O95196 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CSPG5O95196 AC239809.2-201ENST00000415381 517 ntBASIC21.97■■□□□ 1.11
CSPG5O95196 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.97■■□□□ 1.11
CSPG5O95196 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.97■■□□□ 1.11
CSPG5O95196 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CSPG5O95196 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.97■■□□□ 1.11
CSPG5O95196 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.97■■□□□ 1.11
CSPG5O95196 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSPG5O95196 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.96■■□□□ 1.11
CSPG5O95196 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.96■■□□□ 1.11
CSPG5O95196 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CSPG5O95196 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CSPG5O95196 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSPG5O95196 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.96■■□□□ 1.11
CSPG5O95196 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.96■■□□□ 1.11
CSPG5O95196 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.96■■□□□ 1.11
CSPG5O95196 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.96■■□□□ 1.11
CSPG5O95196 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.96■■□□□ 1.11
CSPG5O95196 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CSPG5O95196 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CSPG5O95196 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.95■■□□□ 1.1
CSPG5O95196 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CSPG5O95196 RPS2P55-201ENST00000397318 883 ntBASIC21.95■■□□□ 1.1
CSPG5O95196 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSPG5O95196 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.95■■□□□ 1.1
CSPG5O95196 AC107956.1-201ENST00000494359 873 ntBASIC21.95■■□□□ 1.1
CSPG5O95196 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.95■■□□□ 1.1
CSPG5O95196 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.95■■□□□ 1.1
CSPG5O95196 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.95■■□□□ 1.1
CSPG5O95196 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CSPG5O95196 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CSPG5O95196 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 EP400NL-214ENST00000641289 2402 ntBASIC21.95■■□□□ 1.1
CSPG5O95196 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CSPG5O95196 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.95■■□□□ 1.1
CSPG5O95196 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.94■■□□□ 1.1
CSPG5O95196 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CSPG5O95196 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CSPG5O95196 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.94■■□□□ 1.1
CSPG5O95196 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.94■■□□□ 1.1
CSPG5O95196 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CSPG5O95196 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CSPG5O95196 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms