Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.63■□□□□ 0.73
SNRNP200O75643 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SNRNP200O75643 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
SNRNP200O75643 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.63■□□□□ 0.73
SNRNP200O75643 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SNRNP200O75643 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.63■□□□□ 0.73
SNRNP200O75643 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.63■□□□□ 0.73
SNRNP200O75643 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SNRNP200O75643 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNRNP200O75643 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 CYP21A1P-202ENST00000354927 1481 ntBASIC19.62■□□□□ 0.73
SNRNP200O75643 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 MIPEPP3-201ENST00000412105 444 ntBASIC19.62■□□□□ 0.73
SNRNP200O75643 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRNP200O75643 UNC93B5-201ENST00000530315 699 ntBASIC19.62■□□□□ 0.73
SNRNP200O75643 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.62■□□□□ 0.73
SNRNP200O75643 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRNP200O75643 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRNP200O75643 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRNP200O75643 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNRNP200O75643 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNRNP200O75643 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRNP200O75643 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.61■□□□□ 0.73
SNRNP200O75643 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.61■□□□□ 0.73
SNRNP200O75643 AC092118.2-201ENST00000613495 667 ntBASIC19.61■□□□□ 0.73
SNRNP200O75643 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNRNP200O75643 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.61■□□□□ 0.73
SNRNP200O75643 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRNP200O75643 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRNP200O75643 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.61■□□□□ 0.73
SNRNP200O75643 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNRNP200O75643 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRNP200O75643 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
SNRNP200O75643 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNRNP200O75643 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.6■□□□□ 0.73
SNRNP200O75643 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNRNP200O75643 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SNRNP200O75643 MIR4758-201ENST00000577688 71 ntBASIC19.6■□□□□ 0.73
SNRNP200O75643 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNRNP200O75643 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.6■□□□□ 0.73
SNRNP200O75643 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNRNP200O75643 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.6■□□□□ 0.73
SNRNP200O75643 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNRNP200O75643 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRNP200O75643 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.6■□□□□ 0.73
SNRNP200O75643 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNRNP200O75643 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.6■□□□□ 0.73
SNRNP200O75643 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.6■□□□□ 0.73
SNRNP200O75643 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms