Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN11O75508 MIR2861-201ENST00000636310 90 ntBASIC20.97■□□□□ 0.95
CLDN11O75508 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN11O75508 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN11O75508 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN11O75508 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN11O75508 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN11O75508 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN11O75508 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN11O75508 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN11O75508 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN11O75508 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN11O75508 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN11O75508 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN11O75508 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLDN11O75508 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN11O75508 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN11O75508 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.95■□□□□ 0.94
CLDN11O75508 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDN11O75508 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 AC006128.1-201ENST00000624704 1661 ntBASIC20.95■□□□□ 0.94
CLDN11O75508 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN11O75508 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN11O75508 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN11O75508 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN11O75508 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN11O75508 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLDN11O75508 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN11O75508 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN11O75508 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN11O75508 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN11O75508 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLDN11O75508 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CLDN11O75508 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN11O75508 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN11O75508 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN11O75508 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN11O75508 KRT18P6-201ENST00000555540 1265 ntBASIC20.93■□□□□ 0.94
CLDN11O75508 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN11O75508 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN11O75508 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CLDN11O75508 AC083880.1-201ENST00000608266 535 ntBASIC20.93■□□□□ 0.94
CLDN11O75508 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN11O75508 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN11O75508 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN11O75508 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLDN11O75508 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLDN11O75508 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLDN11O75508 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN11O75508 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN11O75508 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN11O75508 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN11O75508 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CLDN11O75508 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN11O75508 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN11O75508 KRT8P36-201ENST00000489121 1440 ntBASIC20.92■□□□□ 0.94
CLDN11O75508 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN11O75508 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms