Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC4O75487 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GPC4O75487 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC4O75487 KRT18P11-201ENST00000435214 1283 ntBASIC20.44■□□□□ 0.86
GPC4O75487 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GPC4O75487 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.44■□□□□ 0.86
GPC4O75487 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.44■□□□□ 0.86
GPC4O75487 MYCNOS-205ENST00000641950 531 ntBASIC20.44■□□□□ 0.86
GPC4O75487 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
GPC4O75487 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GPC4O75487 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GPC4O75487 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC4O75487 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.43■□□□□ 0.86
GPC4O75487 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC4O75487 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.43■□□□□ 0.86
GPC4O75487 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GPC4O75487 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.43■□□□□ 0.86
GPC4O75487 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.43■□□□□ 0.86
GPC4O75487 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.43■□□□□ 0.86
GPC4O75487 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC4O75487 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.43■□□□□ 0.86
GPC4O75487 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.43■□□□□ 0.86
GPC4O75487 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
GPC4O75487 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.43■□□□□ 0.86
GPC4O75487 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.43■□□□□ 0.86
GPC4O75487 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.43■□□□□ 0.86
GPC4O75487 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GPC4O75487 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GPC4O75487 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC4O75487 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
GPC4O75487 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC4O75487 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.42■□□□□ 0.86
GPC4O75487 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC4O75487 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC4O75487 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
GPC4O75487 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.42■□□□□ 0.86
GPC4O75487 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC4O75487 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GPC4O75487 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GPC4O75487 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC4O75487 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 AC243732.1-201ENST00000612648 864 ntBASIC20.41■□□□□ 0.86
GPC4O75487 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GPC4O75487 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC4O75487 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC4O75487 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GPC4O75487 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 AC016769.1-201ENST00000409132 1010 ntBASIC20.4■□□□□ 0.86
GPC4O75487 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
GPC4O75487 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.4■□□□□ 0.86
GPC4O75487 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GPC4O75487 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.4■□□□□ 0.86
GPC4O75487 RBM17P2-201ENST00000616397 1405 ntBASIC20.4■□□□□ 0.86
GPC4O75487 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.4■□□□□ 0.86
GPC4O75487 AC138932.1-201ENST00000534164 6830 ntBASIC20.4■□□□□ 0.86
GPC4O75487 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms