Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM3O75382 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM3O75382 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM3O75382 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM3O75382 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM3O75382 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM3O75382 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM3O75382 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM3O75382 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRIM3O75382 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM3O75382 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM3O75382 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM3O75382 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM3O75382 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM3O75382 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM3O75382 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 AC005229.4-201ENST00000610085 2198 ntBASIC19.01■□□□□ 0.63
TRIM3O75382 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM3O75382 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM3O75382 AC245052.3-201ENST00000450182 901 ntBASIC19.01■□□□□ 0.63
TRIM3O75382 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM3O75382 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM3O75382 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 AC133552.2-202ENST00000575694 574 ntBASIC19.01■□□□□ 0.63
TRIM3O75382 AC104771.1-201ENST00000603335 964 ntBASIC19.01■□□□□ 0.63
TRIM3O75382 AL121832.2-201ENST00000610979 668 ntBASIC19.01■□□□□ 0.63
TRIM3O75382 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM3O75382 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM3O75382 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM3O75382 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM3O75382 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM3O75382 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM3O75382 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19■□□□□ 0.63
TRIM3O75382 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM3O75382 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 GPX1P1-201ENST00000388829 606 ntBASIC19■□□□□ 0.63
TRIM3O75382 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 CYP2T1P-201ENST00000432607 1285 ntBASIC19■□□□□ 0.63
TRIM3O75382 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19■□□□□ 0.63
TRIM3O75382 AL162412.1-201ENST00000567129 965 ntBASIC19■□□□□ 0.63
TRIM3O75382 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TRIM3O75382 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19■□□□□ 0.63
TRIM3O75382 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19■□□□□ 0.63
TRIM3O75382 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19■□□□□ 0.63
TRIM3O75382 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM3O75382 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19■□□□□ 0.63
TRIM3O75382 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM3O75382 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM3O75382 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRIM3O75382 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM3O75382 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM3O75382 AC083906.2-201ENST00000511578 360 ntBASIC18.99■□□□□ 0.63
TRIM3O75382 AL591742.1-201ENST00000604433 565 ntBASIC18.99■□□□□ 0.63
TRIM3O75382 AL109923.1-201ENST00000618799 583 ntBASIC18.99■□□□□ 0.63
TRIM3O75382 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM3O75382 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM3O75382 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM3O75382 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM3O75382 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM3O75382 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM3O75382 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM3O75382 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms