Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238C9JI98 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238C9JI98 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238C9JI98 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238C9JI98 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM238C9JI98 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238C9JI98 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 LONRF2P2-201ENST00000439212 571 ntBASIC14.35□□□□□ -0.11
TMEM238C9JI98 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 HSD17B1P1-201ENST00000590052 955 ntBASIC14.35□□□□□ -0.11
TMEM238C9JI98 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 TNXA-203ENST00000507684 2038 ntBASIC14.35□□□□□ -0.11
TMEM238C9JI98 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.35□□□□□ -0.11
TMEM238C9JI98 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238C9JI98 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.34□□□□□ -0.11
TMEM238C9JI98 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 PCDHAC2-203ENST00000615316 3011 ntBASIC14.34□□□□□ -0.11
TMEM238C9JI98 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 C17orf82-201ENST00000623772 1530 ntBASIC14.34□□□□□ -0.11
TMEM238C9JI98 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238C9JI98 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238C9JI98 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TMEM238C9JI98 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.33□□□□□ -0.11
TMEM238C9JI98 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TMEM238C9JI98 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.33□□□□□ -0.11
TMEM238C9JI98 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TMEM238C9JI98 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.33□□□□□ -0.11
TMEM238C9JI98 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM238C9JI98 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM238C9JI98 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM238C9JI98 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.33□□□□□ -0.12
TMEM238C9JI98 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.33□□□□□ -0.12
TMEM238C9JI98 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM238C9JI98 KRT18P60-201ENST00000312876 1297 ntBASIC14.33□□□□□ -0.12
TMEM238C9JI98 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TMEM238C9JI98 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms