Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 AC110285.5-201ENST00000611501 352 ntBASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SPDYE2BA6NHP3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 KRASP1-201ENST00000407852 552 ntBASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 FAM210CP-201ENST00000445714 574 ntBASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPDYE2BA6NHP3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 LINC01023-201ENST00000606054 436 ntBASIC24.43■■□□□ 1.5
SPDYE2BA6NHP3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 KRT17P2-201ENST00000300992 1314 ntBASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 AL135905.2-201ENST00000584934 1404 ntBASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPDYE2BA6NHP3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 AP001412.1-201ENST00000608405 714 ntBASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPDYE2BA6NHP3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 AL390719.1-204ENST00000412397 1219 ntBASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 AC113410.3-201ENST00000623366 203 ntBASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPDYE2BA6NHP3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPDYE2BA6NHP3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.5
SPDYE2BA6NHP3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPDYE2BA6NHP3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms