Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.17■□□□□ 0.18
RBFOX3A6NFN3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 AC020763.4-201ENST00000623414 4170 ntBASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 AL034346.1-201ENST00000568244 1277 ntBASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RBFOX3A6NFN3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 AL499627.2-201ENST00000606283 725 ntBASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RBFOX3A6NFN3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
RBFOX3A6NFN3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 AC090340.1-201ENST00000620778 4980 ntBASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.14■□□□□ 0.17
RBFOX3A6NFN3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 AC129492.7-201ENST00000622992 756 ntBASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBFOX3A6NFN3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms