Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 KRT18P6-201ENST00000555540 1265 ntBASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRCOL1A6NCL2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 CD99P1-205ENST00000527459 561 ntBASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
LRCOL1A6NCL2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 AC100791.3-201ENST00000617619 330 ntBASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.66□□□□□ -0.22
LRCOL1A6NCL2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 AC007322.3-201ENST00000426526 701 ntBASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRCOL1A6NCL2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms