Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 KRT87P-202ENST00000534226 1464 ntBASIC20.43■□□□□ 0.86
CCDC189A1A4V9 PLK5-205ENST00000642079 1969 ntBASIC20.43■□□□□ 0.86
CCDC189A1A4V9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 AC005082.1-201ENST00000413042 2259 ntBASIC20.42■□□□□ 0.86
CCDC189A1A4V9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC189A1A4V9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 AC027612.3-201ENST00000413684 1047 ntBASIC20.41■□□□□ 0.86
CCDC189A1A4V9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC189A1A4V9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 AC138907.5-202ENST00000569484 235 ntBASIC20.4■□□□□ 0.86
CCDC189A1A4V9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC189A1A4V9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CCDC189A1A4V9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 IRS3P-201ENST00000223076 1006 ntBASIC20.39■□□□□ 0.85
CCDC189A1A4V9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 AC079140.4-201ENST00000507448 529 ntBASIC20.39■□□□□ 0.85
CCDC189A1A4V9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC189A1A4V9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
CCDC189A1A4V9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 KRT16P2-201ENST00000414673 1423 ntBASIC20.38■□□□□ 0.85
CCDC189A1A4V9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 AC011484.1-201ENST00000377652 1995 ntBASIC20.38■□□□□ 0.85
CCDC189A1A4V9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC189A1A4V9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms