Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 YBX1P1-201ENST00000445822 960 ntBASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MIR2861-201ENST00000636310 90 ntBASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TERF1P2-201ENST00000583350 1212 ntBASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV10-1A0A0K0K1A3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV10-1A0A0K0K1A3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms