Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 AF201337.1-201ENST00000520239 748 ntBASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-4A0A0C4DH59 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC006970.2-201ENST00000450065 779 ntBASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 GABARAPL3-202ENST00000624044 1851 ntBASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRBV5-4A0A0C4DH59 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 NCF1B-203ENST00000435988 1254 ntBASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC105036.2-201ENST00000569468 176 ntBASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 AL121832.2-201ENST00000610979 668 ntBASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-4A0A0C4DH59 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC020907.5-201ENST00000624372 1936 ntBASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 KRT18P68-201ENST00000392293 1000 ntBASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 AL355472.2-201ENST00000422958 438 ntBASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 AC105020.6-201ENST00000621523 1217 ntBASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-4A0A0C4DH59 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-4A0A0C4DH59 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRBV5-4A0A0C4DH59 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV5-4A0A0C4DH59 AL157384.1-201ENST00000445995 2473 ntBASIC20.17■□□□□ 0.82
TRBV5-4A0A0C4DH59 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-4A0A0C4DH59 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms