Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 AL353708.3-201ENST00000610272 989 ntBASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LOC102724428A0A0B4J2F2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
LOC102724428A0A0B4J2F2 C9orf163-202ENST00000624034 2573 ntBASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 AC026471.5-201ENST00000615068 467 ntBASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LOC102724428A0A0B4J2F2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC102724428A0A0B4J2F2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 AP003071.4-201ENST00000562276 1284 ntBASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LOC102724428A0A0B4J2F2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LOC102724428A0A0B4J2F2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LOC102724428A0A0B4J2F2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LOC102724428A0A0B4J2F2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms