Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 AC024257.2-201ENST00000549699 147 ntBASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 AC008764.7-201ENST00000593779 1081 ntBASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV5A0A0B4J249 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 AC092720.2-201ENST00000602388 1665 ntBASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV5A0A0B4J249 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 AP004607.4-201ENST00000530158 1459 ntBASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 AL136162.1-201ENST00000607711 1078 ntBASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 TSPY26P-201ENST00000476365 1326 ntBASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 TCF3P1-201ENST00000423021 1937 ntBASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV5A0A0B4J249 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV5A0A0B4J249 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.84■□□□□ 0.13
TRAV5A0A0B4J249 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms