Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 AC092368.3-202ENST00000574180 1591 ntBASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 AC008687.6-201ENST00000596318 630 ntBASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 AC066615.1-201ENST00000640911 628 ntBASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV10A0A0B4J240 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 AC087633.2-202ENST00000565166 1439 ntBASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PRORSD1P-201ENST00000295112 541 ntBASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PNMA6B-201ENST00000538162 1200 ntBASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV10A0A0B4J240 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 AC128676.1-201ENST00000454392 318 ntBASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 AP006294.2-201ENST00000641667 209 ntBASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV10A0A0B4J240 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV10A0A0B4J240 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms