Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV5A0A0B4J1U4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.41■□□□□ 0.54
TRGV5A0A0B4J1U4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV5A0A0B4J1U4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV5A0A0B4J1U4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV5A0A0B4J1U4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV5A0A0B4J1U4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV5A0A0B4J1U4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV5A0A0B4J1U4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV5A0A0B4J1U4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 UNC93B4-201ENST00000505679 747 ntBASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV5A0A0B4J1U4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV5A0A0B4J1U4 AL024507.2-201ENST00000606070 2574 ntBASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 AC008403.3-201ENST00000598924 454 ntBASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 AC073648.6-201ENST00000641589 218 ntBASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 AL049796.1-201ENST00000565336 1766 ntBASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRGV5A0A0B4J1U4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms