Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-1A0A0A6YYK1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC005224.4-201ENST00000583262 1652 ntBASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 AC126544.1-201ENST00000580842 1059 ntBASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 MIR4767-201ENST00000582827 78 ntBASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-1A0A0A6YYK1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TCF3P1-201ENST00000423021 1937 ntBASIC15.51■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC092720.2-201ENST00000602388 1665 ntBASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 IGHV3-19-201ENST00000521488 291 ntBASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC233992.3-201ENST00000607491 485 ntBASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms