Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV6-7A0A0A0MS04 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 TPRG1LP1-201ENST00000598702 760 ntBASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC110285.6-201ENST00000617652 491 ntBASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-7A0A0A0MS04 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 AL512408.1-201ENST00000569378 2000 ntBASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 AL031432.3-201ENST00000607698 485 ntBASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 AL354811.1-201ENST00000610286 706 ntBASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC099778.1-201ENST00000568593 1911 ntBASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-7A0A0A0MS04 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 POU5F1P4-201ENST00000413175 1085 ntBASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC116562.4-201ENST00000641316 2276 ntBASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC008175.2-201ENST00000612840 297 ntBASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms