Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ST13P18-201ENST00000456632 1027 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 NPAP1P2-201ENST00000456716 1234 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 RN7SL845P-201ENST00000484385 290 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 LINC00498-201ENST00000504369 455 ntTSL 3 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 ST13P5-201ENST00000526214 1110 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 OR7E5P-201ENST00000529916 706 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 TUBBP8-201ENST00000560273 1232 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 RN7SL117P-201ENST00000580765 296 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 RNA5SP357-201ENST00000607318 119 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 AL354872.2-201ENST00000607679 466 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 AC116003.3-201ENST00000612669 541 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 AC127381.3-201ENST00000622901 303 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 AC006141.1-201ENST00000581917 2170 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 CSRP3-201ENST00000265968 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 PSMC1P10-201ENST00000434820 1327 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 AC007228.2-201ENST00000602145 1328 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CTAGE14P-201ENST00000397819 2403 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 IL1A-201ENST00000263339 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC027613.1-202ENST00000513136 1957 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AL353583.1-201ENST00000624195 1855 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CALCOCO2-203ENST00000416445 1438 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 MIR629-201ENST00000385230 97 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 RPL5P31-201ENST00000399168 635 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 RPS12P16-201ENST00000399739 407 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC073263.1-202ENST00000401851 924 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 MIR1208-201ENST00000408334 73 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 LINC02246-201ENST00000412426 991 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 SLC2A1-AS1-202ENST00000431759 1124 ntTSL 2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC022400.1-201ENST00000434147 445 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 RN7SL397P-201ENST00000487309 298 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 RN7SL632P-201ENST00000489734 266 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC090311.1-201ENST00000490739 249 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC008897.2-201ENST00000501886 527 ntTSL 4 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 MICE-207ENST00000510438 1157 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC092435.1-201ENST00000513711 443 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 ZBED3-AS1-215ENST00000514905 1156 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 TAGLN2P1-201ENST00000524097 587 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 MORN5-205ENST00000536616 596 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 TUBB4BP1-201ENST00000545422 178 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AF111167.1-201ENST00000555909 704 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AL079307.2-201ENST00000557308 448 ntTSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 RN7SL783P-201ENST00000577950 301 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 AC080112.1-201ENST00000583752 487 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CYP2B7P-204ENST00000599831 1272 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.24□□□□□ -1.09
SNX18Q96RF0 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SNX18Q96RF0 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNX18Q96RF0 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms