Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LMO3Q8TAP4 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 HERC2P3-206ENST00000429257 4088 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AL590617.1-201ENST00000405630 748 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AL589763.1-201ENST00000412257 791 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 Z98751.1-201ENST00000413827 381 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 OR51A8P-201ENST00000421277 940 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CRIP1P4-201ENST00000442565 229 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 HNRNPA1P43-201ENST00000452680 910 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ENPP7P2-201ENST00000462675 943 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 OR51A8P-202ENST00000641606 1038 ntBASIC9.51□□□□□ -0.89
LMO3Q8TAP4 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LMO3Q8TAP4 LRRC37A4P-202ENST00000581296 5372 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 MED28P1-201ENST00000399158 571 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 CHCHD4P2-201ENST00000431135 420 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC084809.1-201ENST00000435733 591 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 LINC00578-204ENST00000446548 519 ntTSL 4 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AL445189.2-201ENST00000447543 259 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ZNF90P3-201ENST00000450345 1192 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 ASS1P12-201ENST00000452496 1227 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC107302.1-201ENST00000467059 1032 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC044787.1-201ENST00000497325 792 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC024451.3-201ENST00000517810 463 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 MOK-239ENST00000561150 568 ntTSL 4 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 LINC02152-201ENST00000566208 1281 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 RPIAP1-201ENST00000587900 742 ntBASIC9.5□□□□□ -0.89
LMO3Q8TAP4 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LMO3Q8TAP4 MIR3150A-201ENST00000636546 80 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms