Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
P04436 AP001120.1-201ENST00000561598 3710 ntBASIC8.3□□□□□ -1.08
P04436 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.3□□□□□ -1.08
P04436 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
P04436 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
P04436 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 AL023280.1-201ENST00000414840 1423 ntBASIC8.29□□□□□ -1.08
P04436 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.29□□□□□ -1.08
P04436 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC8.29□□□□□ -1.08
P04436 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
P04436 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
P04436 COX17P1-201ENST00000378775 192 ntBASIC8.29□□□□□ -1.08
P04436 ATG10-IT1-201ENST00000396880 487 ntBASIC8.29□□□□□ -1.08
P04436 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC8.29□□□□□ -1.08
P04436 AC245452.3-201ENST00000413294 162 ntBASIC8.29□□□□□ -1.08
P04436 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC8.29□□□□□ -1.08
P04436 AC009501.2-201ENST00000428700 312 ntBASIC8.29□□□□□ -1.08
P04436 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 RN7SL302P-201ENST00000475999 300 ntBASIC8.29□□□□□ -1.08
P04436 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 RN7SL316P-201ENST00000483452 272 ntBASIC8.29□□□□□ -1.08
P04436 RN7SL700P-201ENST00000496982 294 ntBASIC8.29□□□□□ -1.08
P04436 RN7SL62P-201ENST00000498506 297 ntBASIC8.29□□□□□ -1.08
P04436 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC8.29□□□□□ -1.08
P04436 RPL23AP96-201ENST00000514593 591 ntBASIC8.29□□□□□ -1.08
P04436 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
P04436 OR7E8P-201ENST00000532847 1000 ntBASIC8.29□□□□□ -1.08
P04436 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC8.29□□□□□ -1.08
P04436 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC8.29□□□□□ -1.08
P04436 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC8.29□□□□□ -1.08
P04436 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC8.29□□□□□ -1.08
P04436 AC063950.1-202ENST00000600133 568 ntBASIC8.29□□□□□ -1.08
P04436 RPL17P3-201ENST00000605695 525 ntBASIC8.29□□□□□ -1.08
P04436 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 AC110741.3-201ENST00000611983 659 ntBASIC8.29□□□□□ -1.08
P04436 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC8.29□□□□□ -1.08
P04436 AL109614.1-201ENST00000620327 419 ntBASIC8.29□□□□□ -1.08
P04436 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
P04436 AC247036.7-201ENST00000639643 304 ntBASIC8.29□□□□□ -1.08
P04436 LINC02211-202ENST00000641091 839 ntBASIC8.29□□□□□ -1.08
P04436 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC8.29□□□□□ -1.08
P04436 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 AL135903.1-201ENST00000402742 1590 ntBASIC8.29□□□□□ -1.08
P04436 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 AC079341.1-201ENST00000567769 2266 ntBASIC8.29□□□□□ -1.08
P04436 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
P04436 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC8.29□□□□□ -1.08
P04436 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 RSPH10B2-202ENST00000403107 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 AC018521.7-201ENST00000580282 2927 ntBASIC8.29□□□□□ -1.08
P04436 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
P04436 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 Z95114.3-201ENST00000624395 1921 ntBASIC8.29□□□□□ -1.08
P04436 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
P04436 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 NTN4-202ENST00000344911 3152 ntTSL 5 BASIC8.28□□□□□ -1.08
P04436 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.28□□□□□ -1.08
P04436 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
P04436 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 DENND1B-201ENST00000235453 2195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 MEST-203ENST00000378576 2180 ntTSL 5 BASIC8.28□□□□□ -1.08
P04436 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
P04436 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.28□□□□□ -1.08
P04436 PART1-202ENST00000506884 2068 ntTSL 2 BASIC8.28□□□□□ -1.08
P04436 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
P04436 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
P04436 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
P04436 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms