RNA–Protein interactions for RNA: ENST00000439685.6

CCDC80-202, Transcript of coiled-coil domain containing 80, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC80, Length 3,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC80-202ENST00000439685 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.66
CCDC80-202ENST00000439685 HRCP23327 699 aa17.14■□□□□ 0.33
CCDC80-202ENST00000439685 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
CCDC80-202ENST00000439685 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
CCDC80-202ENST00000439685 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
CCDC80-202ENST00000439685 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
CCDC80-202ENST00000439685 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.23
CCDC80-202ENST00000439685 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
CCDC80-202ENST00000439685 SHROOM4Q9ULL8 1493 aa16.5■□□□□ 0.23
CCDC80-202ENST00000439685 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
CCDC80-202ENST00000439685 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
CCDC80-202ENST00000439685 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
CCDC80-202ENST00000439685 MYT1Q01538 1121 aa16.21■□□□□ 0.18
CCDC80-202ENST00000439685 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
CCDC80-202ENST00000439685 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
CCDC80-202ENST00000439685 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
CCDC80-202ENST00000439685 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
CCDC80-202ENST00000439685 ACIN1Q9UKV3 1341 aaKnown RBP15.81■□□□□ 0.12
CCDC80-202ENST00000439685 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
CCDC80-202ENST00000439685 ABCC9O60706 1549 aa15.57■□□□□ 0.08
CCDC80-202ENST00000439685 CENPBP07199 599 aaPredicted RBP15.56■□□□□ 0.08
CCDC80-202ENST00000439685 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
CCDC80-202ENST00000439685 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
CCDC80-202ENST00000439685 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
CCDC80-202ENST00000439685 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
CCDC80-202ENST00000439685 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
CCDC80-202ENST00000439685 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
CCDC80-202ENST00000439685 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
CCDC80-202ENST00000439685 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
CCDC80-202ENST00000439685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
CCDC80-202ENST00000439685 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
CCDC80-202ENST00000439685 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
CCDC80-202ENST00000439685 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
CCDC80-202ENST00000439685 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
CCDC80-202ENST00000439685 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
CCDC80-202ENST00000439685 MIER1Q8N108 512 aa15□□□□□ -0.01
CCDC80-202ENST00000439685 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
CCDC80-202ENST00000439685 ANP32EQ9BTT0 268 aa14.95□□□□□ -0.02
CCDC80-202ENST00000439685 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
CCDC80-202ENST00000439685 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
CCDC80-202ENST00000439685 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
CCDC80-202ENST00000439685 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
CCDC80-202ENST00000439685 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
CCDC80-202ENST00000439685 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
CCDC80-202ENST00000439685 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
CCDC80-202ENST00000439685 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
CCDC80-202ENST00000439685 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
CCDC80-202ENST00000439685 WIZO95785 1651 aa14.83□□□□□ -0.03
CCDC80-202ENST00000439685 EEA1Q15075 1411 aa14.82□□□□□ -0.04
CCDC80-202ENST00000439685 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
CCDC80-202ENST00000439685 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
CCDC80-202ENST00000439685 NACADO15069 1562 aa14.74□□□□□ -0.05
CCDC80-202ENST00000439685 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
CCDC80-202ENST00000439685 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
CCDC80-202ENST00000439685 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
CCDC80-202ENST00000439685 SOGA1O94964 1423 aa14.66□□□□□ -0.06
CCDC80-202ENST00000439685 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
CCDC80-202ENST00000439685 KIF21BO75037 1637 aa14.62□□□□□ -0.07
CCDC80-202ENST00000439685 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
CCDC80-202ENST00000439685 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
CCDC80-202ENST00000439685 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
CCDC80-202ENST00000439685 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
CCDC80-202ENST00000439685 CEP164Q9UPV0 1460 aa14.54□□□□□ -0.08
CCDC80-202ENST00000439685 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
CCDC80-202ENST00000439685 CLIP1P30622 1438 aa14.53□□□□□ -0.08
CCDC80-202ENST00000439685 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
CCDC80-202ENST00000439685 CUX2O14529 1486 aa14.5□□□□□ -0.09
CCDC80-202ENST00000439685 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
CCDC80-202ENST00000439685 RBM19Q9Y4C8 960 aaKnown RBP14.47□□□□□ -0.09
CCDC80-202ENST00000439685 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
CCDC80-202ENST00000439685 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
CCDC80-202ENST00000439685 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
CCDC80-202ENST00000439685 FKBP8Q14318 412 aa14.37□□□□□ -0.11
CCDC80-202ENST00000439685 MSH5O43196 834 aa14.35□□□□□ -0.11
CCDC80-202ENST00000439685 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
CCDC80-202ENST00000439685 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
CCDC80-202ENST00000439685 APLP2Q06481 763 aa14.33□□□□□ -0.12
CCDC80-202ENST00000439685 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
CCDC80-202ENST00000439685 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
CCDC80-202ENST00000439685 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
CCDC80-202ENST00000439685 BCANQ96GW7 911 aa14.29□□□□□ -0.12
CCDC80-202ENST00000439685 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
CCDC80-202ENST00000439685 CCER2I3L3R5 266 aa14.28□□□□□ -0.12
CCDC80-202ENST00000439685 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
CCDC80-202ENST00000439685 NEFLP07196 543 aa14.27□□□□□ -0.13
CCDC80-202ENST00000439685 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
CCDC80-202ENST00000439685 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
CCDC80-202ENST00000439685 PPP1R15AO75807 674 aaPredicted RBP14.23□□□□□ -0.13
CCDC80-202ENST00000439685 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
CCDC80-202ENST00000439685 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
CCDC80-202ENST00000439685 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
CCDC80-202ENST00000439685 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
CCDC80-202ENST00000439685 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
CCDC80-202ENST00000439685 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
CCDC80-202ENST00000439685 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
CCDC80-202ENST00000439685 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
CCDC80-202ENST00000439685 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
CCDC80-202ENST00000439685 MAP3K1Q13233 1512 aa14.13□□□□□ -0.15
CCDC80-202ENST00000439685 ITGAEP38570 1179 aa14.13□□□□□ -0.15
CCDC80-202ENST00000439685 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms