Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC9.61□□□□□ -0.87
MTHFRP42898 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 H3F3AP6-201ENST00000230495 411 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 RN7SKP294-201ENST00000362770 338 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 RNU1-120P-201ENST00000363009 157 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 RN7SKP204-201ENST00000365481 310 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 H3F3AP4-201ENST00000369387 411 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 MIR636-201ENST00000384825 99 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 AL136380.2-201ENST00000411837 492 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 RPSAP63-201ENST00000412013 888 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC9.61□□□□□ -0.87
MTHFRP42898 BMP2KL-201ENST00000414251 1225 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 AC009501.2-201ENST00000428700 312 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 AC006534.1-201ENST00000469329 541 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 AL590867.2-201ENST00000492974 447 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 RPL23AP66-201ENST00000494341 479 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 ACTBP6-201ENST00000520036 1090 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 ATP6V1G1P2-201ENST00000522436 346 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC9.61□□□□□ -0.87
MTHFRP42898 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC9.61□□□□□ -0.87
MTHFRP42898 AC009133.1-204ENST00000569809 967 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC9.61□□□□□ -0.87
MTHFRP42898 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC9.61□□□□□ -0.87
MTHFRP42898 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 FCRLA-210ENST00000367959 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 AC016526.3-201ENST00000624275 3931 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 ATP8B5P-202ENST00000423138 2157 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 NPIPB10P-201ENST00000424293 1354 ntBASIC9.61□□□□□ -0.87
MTHFRP42898 AC117457.1-201ENST00000614557 1391 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.61□□□□□ -0.87
MTHFRP42898 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 ZNF259P1-202ENST00000572422 4912 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 AC118282.4-201ENST00000623090 1712 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 PAICSP3-201ENST00000428007 1168 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 RPE-207ENST00000435437 858 ntTSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 RBMY2OP-201ENST00000447105 810 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 AC106868.1-201ENST00000505272 992 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 THAP6-211ENST00000507885 896 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC9.6□□□□□ -0.87
MTHFRP42898 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC9.6□□□□□ -0.87
MTHFRP42898 IGLV3-29-201ENST00000520084 244 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC9.6□□□□□ -0.87
MTHFRP42898 AC016877.2-201ENST00000522128 1069 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 OR1D4-201ENST00000525719 939 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
MTHFRP42898 SCAND2P-204ENST00000541103 669 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC9.6□□□□□ -0.87
MTHFRP42898 NUTF2P6-201ENST00000560892 385 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
MTHFRP42898 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC9.6□□□□□ -0.87
MTHFRP42898 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 AL445648.1-201ENST00000641176 886 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 AC008507.5-201ENST00000624591 1969 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms