Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
P04436 AC211476.4-201ENST00000275546 699 ntBASIC8.31□□□□□ -1.08
P04436 OR4C15-201ENST00000314644 1113 ntBASIC8.31□□□□□ -1.08
P04436 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 PMS2P5-201ENST00000398065 516 ntBASIC8.31□□□□□ -1.08
P04436 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 AL023773.2-201ENST00000412173 1005 ntBASIC8.31□□□□□ -1.08
P04436 RPL13AP7-201ENST00000425147 611 ntBASIC8.31□□□□□ -1.08
P04436 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 AL663058.1-201ENST00000453379 353 ntBASIC8.31□□□□□ -1.08
P04436 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 AMD1P3-201ENST00000508874 994 ntBASIC8.31□□□□□ -1.08
P04436 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC8.31□□□□□ -1.08
P04436 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC8.31□□□□□ -1.08
P04436 TRMT112P7-201ENST00000603133 367 ntBASIC8.31□□□□□ -1.08
P04436 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC8.31□□□□□ -1.08
P04436 AC113349.2-201ENST00000607804 377 ntBASIC8.31□□□□□ -1.08
P04436 AC092329.4-206ENST00000640517 561 ntTSL 4 BASIC8.31□□□□□ -1.08
P04436 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
P04436 ZNF429-201ENST00000358491 2233 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
P04436 AC239859.1-201ENST00000449715 2594 ntBASIC8.31□□□□□ -1.08
P04436 DLSTP1-201ENST00000444241 1354 ntBASIC8.31□□□□□ -1.08
P04436 EEF1A1P7-201ENST00000596811 1394 ntBASIC8.31□□□□□ -1.08
P04436 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
P04436 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC8.31□□□□□ -1.08
P04436 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 CASP4-203ENST00000444739 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
P04436 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 TROVE2-202ENST00000367443 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC8.31□□□□□ -1.08
P04436 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 LILRB1-205ENST00000396331 2960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
P04436 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC8.3□□□□□ -1.08
P04436 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
P04436 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 AL591222.1-201ENST00000568063 3844 ntBASIC8.3□□□□□ -1.08
P04436 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 NCOA4P4-201ENST00000513338 1861 ntBASIC8.3□□□□□ -1.08
P04436 TOX4P1-201ENST00000514955 1862 ntBASIC8.3□□□□□ -1.08
P04436 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.3□□□□□ -1.08
P04436 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
P04436 SNX19P1-201ENST00000444901 2981 ntBASIC8.3□□□□□ -1.08
P04436 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
P04436 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.3□□□□□ -1.08
P04436 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 RIMKLBP1-201ENST00000408914 1164 ntBASIC8.3□□□□□ -1.08
P04436 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC8.3□□□□□ -1.08
P04436 Z83838.1-201ENST00000431036 925 ntBASIC8.3□□□□□ -1.08
P04436 AP000532.1-201ENST00000440999 177 ntBASIC8.3□□□□□ -1.08
P04436 PFN1P1-201ENST00000442087 423 ntBASIC8.3□□□□□ -1.08
P04436 RBMX2P1-201ENST00000454795 836 ntBASIC8.3□□□□□ -1.08
P04436 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 RN7SL420P-201ENST00000463843 298 ntBASIC8.3□□□□□ -1.08
P04436 RN7SL305P-201ENST00000464862 281 ntBASIC8.3□□□□□ -1.08
P04436 TMED10P2-201ENST00000474255 612 ntBASIC8.3□□□□□ -1.08
P04436 AP001318.1-201ENST00000476981 321 ntBASIC8.3□□□□□ -1.08
P04436 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AC098679.3-203ENST00000514881 919 ntBASIC8.3□□□□□ -1.08
P04436 IGLV3-29-201ENST00000520084 244 ntBASIC8.3□□□□□ -1.08
P04436 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
P04436 AP005135.1-201ENST00000532071 714 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AP003396.2-201ENST00000533726 1297 ntBASIC8.3□□□□□ -1.08
P04436 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC8.3□□□□□ -1.08
P04436 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AC009237.16-201ENST00000612987 506 ntBASIC8.3□□□□□ -1.08
P04436 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
P04436 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC8.3□□□□□ -1.08
P04436 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
P04436 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms