Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
R3HDM2Q9Y2K5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
R3HDM2Q9Y2K5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L2-201ENST00000561772 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 TERF1P2-201ENST00000583350 1212 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L6-201ENST00000626483 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L1-201ENST00000627662 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L8-201ENST00000629013 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L3-201ENST00000630187 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L7-201ENST00000630678 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 DUX4L5-201ENST00000630834 1275 ntBASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HDM2Q9Y2K5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
R3HDM2Q9Y2K5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.2■□□□□ 0.99
R3HDM2Q9Y2K5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
R3HDM2Q9Y2K5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 AC123595.1-201ENST00000440769 1046 ntBASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 CCDC92B-201ENST00000575506 885 ntBASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 AC120498.10-201ENST00000621827 505 ntBASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 AC004854.2-201ENST00000608450 1441 ntBASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
R3HDM2Q9Y2K5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.18■□□□□ 0.98
R3HDM2Q9Y2K5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms