Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 AC027612.3-201ENST00000413684 1047 ntBASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
HHLA3Q9XRX5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 ZNRF2P3-201ENST00000424200 374 ntBASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HHLA3Q9XRX5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 TPRG1LP1-201ENST00000598702 760 ntBASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 LINC02228-203ENST00000641970 1355 ntBASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 AL049796.1-201ENST00000565336 1766 ntBASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HHLA3Q9XRX5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms