Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF216Q9NWF9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 AL158211.1-201ENST00000566763 763 ntBASIC23.28■■□□□ 1.32
RNF216Q9NWF9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF216Q9NWF9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 TSPY6P-201ENST00000448518 926 ntBASIC23.27■■□□□ 1.32
RNF216Q9NWF9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 AC092451.2-201ENST00000538746 658 ntBASIC23.27■■□□□ 1.32
RNF216Q9NWF9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF216Q9NWF9 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC23.27■■□□□ 1.31
RNF216Q9NWF9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RNF216Q9NWF9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 AC013410.2-201ENST00000422627 201 ntBASIC23.25■■□□□ 1.31
RNF216Q9NWF9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 AC025423.2-201ENST00000537570 439 ntBASIC23.25■■□□□ 1.31
RNF216Q9NWF9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 FAM99A-202ENST00000538190 1989 ntBASIC23.25■■□□□ 1.31
RNF216Q9NWF9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF216Q9NWF9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 ANKRD19P-201ENST00000338192 862 ntBASIC23.24■■□□□ 1.31
RNF216Q9NWF9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 SLC7A5P2-201ENST00000553010 536 ntBASIC23.24■■□□□ 1.31
RNF216Q9NWF9 AC133552.2-202ENST00000575694 574 ntBASIC23.24■■□□□ 1.31
RNF216Q9NWF9 AC069503.1-202ENST00000616576 642 ntBASIC23.24■■□□□ 1.31
RNF216Q9NWF9 AC010536.3-201ENST00000620306 533 ntBASIC23.24■■□□□ 1.31
RNF216Q9NWF9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.24■■□□□ 1.31
RNF216Q9NWF9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF216Q9NWF9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF216Q9NWF9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF216Q9NWF9 CD99P1-205ENST00000527459 561 ntBASIC23.23■■□□□ 1.31
RNF216Q9NWF9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RNF216Q9NWF9 AC053503.5-201ENST00000601508 636 ntBASIC23.23■■□□□ 1.31
RNF216Q9NWF9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms