Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
UPF2Q9HAU5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UPF2Q9HAU5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UPF2Q9HAU5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 AC005224.4-201ENST00000583262 1652 ntBASIC25.09■■□□□ 1.61
UPF2Q9HAU5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UPF2Q9HAU5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 AC126544.1-201ENST00000580842 1059 ntBASIC25.08■■□□□ 1.61
UPF2Q9HAU5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
UPF2Q9HAU5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
UPF2Q9HAU5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UPF2Q9HAU5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UPF2Q9HAU5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 RNF165-205ENST00000588679 2904 ntBASIC25.07■■□□□ 1.6
UPF2Q9HAU5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC25.07■■□□□ 1.6
UPF2Q9HAU5 AC092720.2-201ENST00000602388 1665 ntBASIC25.07■■□□□ 1.6
UPF2Q9HAU5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 IGHV3-19-201ENST00000521488 291 ntBASIC25.06■■□□□ 1.6
UPF2Q9HAU5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UPF2Q9HAU5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 AP004607.4-201ENST00000530158 1459 ntBASIC25.05■■□□□ 1.6
UPF2Q9HAU5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 AC233992.3-201ENST00000607491 485 ntBASIC25.05■■□□□ 1.6
UPF2Q9HAU5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.05■■□□□ 1.6
UPF2Q9HAU5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC25.04■■□□□ 1.6
UPF2Q9HAU5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
UPF2Q9HAU5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
UPF2Q9HAU5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.04■■□□□ 1.6
UPF2Q9HAU5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.04■■□□□ 1.6
UPF2Q9HAU5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms