Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 AP001160.3-201ENST00000601484 763 ntBASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN28AQ9H9Z2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
LIN28AQ9H9Z2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LIN28AQ9H9Z2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
LIN28AQ9H9Z2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LIN28AQ9H9Z2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LIN28AQ9H9Z2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.63■□□□□ 0.73
LIN28AQ9H9Z2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 AC006015.1-201ENST00000429970 570 ntBASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 EEF1DP3-203ENST00000566025 782 ntBASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN28AQ9H9Z2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.61■□□□□ 0.73
LIN28AQ9H9Z2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.6■□□□□ 0.73
LIN28AQ9H9Z2 AC053503.5-201ENST00000601508 636 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms