Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AC142381.2-201ENST00000566120 298 ntBASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AC120498.10-201ENST00000621827 505 ntBASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 FP700111.2-201ENST00000619190 1892 ntBASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR2J3Q9H1A7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 IRS3P-201ENST00000223076 1006 ntBASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 AC245052.3-201ENST00000450182 901 ntBASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR2J3Q9H1A7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
POLR2J3Q9H1A7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.89■□□□□ 0.62
POLR2J3Q9H1A7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR2J3Q9H1A7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 AC010141.2-201ENST00000452426 721 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms