Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.3■■□□□ 1
SNRNP25Q9BV90 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.3■■□□□ 1
SNRNP25Q9BV90 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNRNP25Q9BV90 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.3■■□□□ 1
SNRNP25Q9BV90 AL591742.1-201ENST00000604433 565 ntBASIC21.3■■□□□ 1
SNRNP25Q9BV90 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SNRNP25Q9BV90 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.3■■□□□ 1
SNRNP25Q9BV90 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.29■■□□□ 1
SNRNP25Q9BV90 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
SNRNP25Q9BV90 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.29■■□□□ 1
SNRNP25Q9BV90 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 AC016405.3-201ENST00000607710 860 ntBASIC21.29■■□□□ 1
SNRNP25Q9BV90 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 MIR2861-201ENST00000636310 90 ntBASIC21.29■■□□□ 1
SNRNP25Q9BV90 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.29■■□□□ 1
SNRNP25Q9BV90 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRNP25Q9BV90 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.28■■□□□ 1
SNRNP25Q9BV90 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.28■■□□□ 1
SNRNP25Q9BV90 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRNP25Q9BV90 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 FAM21FP-204ENST00000608637 956 ntBASIC21.27■■□□□ 1
SNRNP25Q9BV90 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP25Q9BV90 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 LINC01521-201ENST00000504184 1943 ntBASIC21.27■■□□□ 1
SNRNP25Q9BV90 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.27■■□□□ 1
SNRNP25Q9BV90 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 GABARAPL3-202ENST00000624044 1851 ntBASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 AL162412.1-201ENST00000567129 965 ntBASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 AC068338.2-201ENST00000563278 1430 ntBASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.26■□□□□ 0.99
SNRNP25Q9BV90 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP25Q9BV90 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms