Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTBDNQ9BSG5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RTBDNQ9BSG5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 AP000974.1-201ENST00000623909 2387 ntBASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.99■□□□□ 0.31
RTBDNQ9BSG5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTBDNQ9BSG5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.97■□□□□ 0.31
RTBDNQ9BSG5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RTBDNQ9BSG5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTBDNQ9BSG5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.96■□□□□ 0.3
RTBDNQ9BSG5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTBDNQ9BSG5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RTBDNQ9BSG5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTBDNQ9BSG5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms