Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF2Q99805 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.94■□□□□ 0.62
TM9SF2Q99805 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF2Q99805 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 AC231657.2-201ENST00000624556 255 ntBASIC18.93■□□□□ 0.62
TM9SF2Q99805 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TM9SF2Q99805 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF2Q99805 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TM9SF2Q99805 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF2Q99805 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.91■□□□□ 0.62
TM9SF2Q99805 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 AC120498.10-201ENST00000621827 505 ntBASIC18.91■□□□□ 0.62
TM9SF2Q99805 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
TM9SF2Q99805 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF2Q99805 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 SLC7A5P1-201ENST00000568957 537 ntBASIC18.9■□□□□ 0.62
TM9SF2Q99805 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 AC008175.2-201ENST00000612840 297 ntBASIC18.9■□□□□ 0.62
TM9SF2Q99805 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.9■□□□□ 0.62
TM9SF2Q99805 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms