Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LITAFQ99732 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.67□□□□□ -0.22
LITAFQ99732 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.67□□□□□ -0.22
LITAFQ99732 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LITAFQ99732 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 MIR4508-201ENST00000584178 70 ntBASIC13.67□□□□□ -0.22
LITAFQ99732 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LITAFQ99732 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
LITAFQ99732 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LITAFQ99732 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LITAFQ99732 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.67□□□□□ -0.22
LITAFQ99732 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LITAFQ99732 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LITAFQ99732 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.66□□□□□ -0.22
LITAFQ99732 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.66□□□□□ -0.22
LITAFQ99732 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 Z82202.1-201ENST00000623446 1880 ntBASIC13.66□□□□□ -0.22
LITAFQ99732 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.66□□□□□ -0.22
LITAFQ99732 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.66□□□□□ -0.22
LITAFQ99732 ABHD17AP3-201ENST00000503096 1137 ntBASIC13.66□□□□□ -0.22
LITAFQ99732 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.66□□□□□ -0.22
LITAFQ99732 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LITAFQ99732 AC010980.1-201ENST00000587192 1142 ntBASIC13.66□□□□□ -0.22
LITAFQ99732 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.66□□□□□ -0.22
LITAFQ99732 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LITAFQ99732 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.66□□□□□ -0.22
LITAFQ99732 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LITAFQ99732 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LITAFQ99732 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LITAFQ99732 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.65□□□□□ -0.22
LITAFQ99732 OR2I1P-207ENST00000453522 948 ntBASIC13.65□□□□□ -0.22
LITAFQ99732 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.65□□□□□ -0.22
LITAFQ99732 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.65□□□□□ -0.22
LITAFQ99732 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 AC021242.3-201ENST00000607598 1377 ntBASIC13.65□□□□□ -0.22
LITAFQ99732 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 TREX1-205ENST00000625293 1783 ntBASIC13.65□□□□□ -0.22
LITAFQ99732 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.65□□□□□ -0.22
LITAFQ99732 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LITAFQ99732 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
LITAFQ99732 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.64□□□□□ -0.23
LITAFQ99732 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.64□□□□□ -0.23
LITAFQ99732 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.64□□□□□ -0.23
LITAFQ99732 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms