Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 KRT18P48-201ENST00000434763 852 ntBASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 AC010947.1-201ENST00000623454 693 ntBASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD1Q96PZ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.58■□□□□ 0.41
CSMD1Q96PZ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 WWOX-216ENST00000569818 525 ntBASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 AP000525.1-201ENST00000608286 694 ntBASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 MYC-208ENST00000641036 567 ntBASIC17.58■□□□□ 0.4
CSMD1Q96PZ7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 AC092068.2-201ENST00000590491 1708 ntBASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 AL031963.3-201ENST00000606441 850 ntBASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 ANOS2P-203ENST00000472227 1816 ntBASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CSMD1Q96PZ7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 AC120498.8-201ENST00000614275 531 ntBASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 AL358472.4-201ENST00000633140 710 ntBASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD1Q96PZ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 AF186192.3-201ENST00000583427 947 ntBASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms