Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 LINC01521-201ENST00000504184 1943 ntBASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 AC016405.3-201ENST00000607710 860 ntBASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 FAM21FP-204ENST00000608637 956 ntBASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 MIR2861-201ENST00000636310 90 ntBASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG4P5Q96PW8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 GABARAPL3-202ENST00000624044 1851 ntBASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 AL162412.1-201ENST00000567129 965 ntBASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CSPG4P5Q96PW8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CSPG4P5Q96PW8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CSPG4P5Q96PW8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CSPG4P5Q96PW8 AC068338.2-201ENST00000563278 1430 ntBASIC21.14■□□□□ 0.98
CSPG4P5Q96PW8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
CSPG4P5Q96PW8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.14■□□□□ 0.98
CSPG4P5Q96PW8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 AC020907.5-201ENST00000624372 1936 ntBASIC21.14■□□□□ 0.97
CSPG4P5Q96PW8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.13■□□□□ 0.97
CSPG4P5Q96PW8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms