Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.08■□□□□ 0.97
C9orf72Q96LT7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
C9orf72Q96LT7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
C9orf72Q96LT7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
C9orf72Q96LT7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
C9orf72Q96LT7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 TERF1P2-201ENST00000583350 1212 ntBASIC21.07■□□□□ 0.96
C9orf72Q96LT7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C9orf72Q96LT7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 KRT18P14-201ENST00000534205 1250 ntBASIC21.06■□□□□ 0.96
C9orf72Q96LT7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C9orf72Q96LT7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 AL162377.1-201ENST00000618844 1793 ntBASIC21.05■□□□□ 0.96
C9orf72Q96LT7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
C9orf72Q96LT7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 AC022517.1-201ENST00000592429 346 ntBASIC21.04■□□□□ 0.96
C9orf72Q96LT7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.04■□□□□ 0.96
C9orf72Q96LT7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C9orf72Q96LT7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C9orf72Q96LT7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms