Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIPA1Q96FS4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIPA1Q96FS4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIPA1Q96FS4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIPA1Q96FS4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.62■□□□□ 0.89
SIPA1Q96FS4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 AL596275.1-201ENST00000423464 877 ntBASIC20.61■□□□□ 0.89
SIPA1Q96FS4 RPPH1-201ENST00000516869 333 ntBASIC20.61■□□□□ 0.89
SIPA1Q96FS4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.61■□□□□ 0.89
SIPA1Q96FS4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 AC008550.1-201ENST00000511500 884 ntBASIC20.6■□□□□ 0.89
SIPA1Q96FS4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 RN7SL471P-201ENST00000580476 299 ntBASIC20.6■□□□□ 0.89
SIPA1Q96FS4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.6■□□□□ 0.89
SIPA1Q96FS4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.59■□□□□ 0.89
SIPA1Q96FS4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIPA1Q96FS4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 AC069544.1-201ENST00000609399 999 ntBASIC20.58■□□□□ 0.89
SIPA1Q96FS4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.58■□□□□ 0.89
SIPA1Q96FS4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.58■□□□□ 0.88
SIPA1Q96FS4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.58■□□□□ 0.88
SIPA1Q96FS4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.88
SIPA1Q96FS4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.88
SIPA1Q96FS4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.57■□□□□ 0.88
SIPA1Q96FS4 POM121L13P-201ENST00000422362 380 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms