Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLCO4A1Q96BD0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLCO4A1Q96BD0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 AC055733.4-201ENST00000638462 1354 ntBASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 MIR3621-201ENST00000580529 85 ntBASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.2■□□□□ 0.66
SLCO4A1Q96BD0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
SLCO4A1Q96BD0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.18■□□□□ 0.66
SLCO4A1Q96BD0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
SLCO4A1Q96BD0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLCO4A1Q96BD0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms