Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.16■□□□□ 0.18
NPIPB3Q92617 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 AL354811.1-201ENST00000610286 706 ntBASIC16.16■□□□□ 0.18
NPIPB3Q92617 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 AL512408.1-201ENST00000569378 2000 ntBASIC16.16■□□□□ 0.18
NPIPB3Q92617 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 POU5F1P4-201ENST00000413175 1085 ntBASIC16.15■□□□□ 0.18
NPIPB3Q92617 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 TPRG1LP1-201ENST00000598702 760 ntBASIC16.15■□□□□ 0.18
NPIPB3Q92617 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB3Q92617 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB3Q92617 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
NPIPB3Q92617 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 AC112907.3-201ENST00000577781 2400 ntBASIC16.14■□□□□ 0.17
NPIPB3Q92617 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 AL031432.3-201ENST00000607698 485 ntBASIC16.14■□□□□ 0.17
NPIPB3Q92617 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB3Q92617 AFG3L1P-217ENST00000557444 2447 ntBASIC16.14■□□□□ 0.17
NPIPB3Q92617 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB3Q92617 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 AC079140.4-201ENST00000507448 529 ntBASIC16.13■□□□□ 0.17
NPIPB3Q92617 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB3Q92617 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 AL162377.1-201ENST00000618844 1793 ntBASIC16.13■□□□□ 0.17
NPIPB3Q92617 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB3Q92617 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB3Q92617 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPB3Q92617 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB3Q92617 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPB3Q92617 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPB3Q92617 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB3Q92617 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB3Q92617 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPB3Q92617 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPB3Q92617 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms