Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 AC007322.1-201ENST00000426983 750 ntBASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 AC006970.2-201ENST00000450065 779 ntBASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
SMARCC2Q8TAQ2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 CROCCP5-201ENST00000436658 830 ntBASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SMARCC2Q8TAQ2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 MIR663A-201ENST00000385250 93 ntBASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 AC245052.3-201ENST00000450182 901 ntBASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 TERF1P5-201ENST00000477545 1207 ntBASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
SMARCC2Q8TAQ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 FP700111.2-201ENST00000619190 1892 ntBASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.02■■□□□ 1.44
SMARCC2Q8TAQ2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.02■■□□□ 1.43
SMARCC2Q8TAQ2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SMARCC2Q8TAQ2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 UQCRFS1P1-201ENST00000435169 820 ntBASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 CNN2P6-201ENST00000439038 900 ntBASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 AC013268.1-206ENST00000638368 961 ntBASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 AC112229.1-201ENST00000639295 961 ntBASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 AC020907.5-201ENST00000624372 1936 ntBASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms